Biology:Pontibacillus

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Pontibacillus is a Gram-positive, spore-forming and strictly aerobic genus of bacteria belonging to the family of Bacillaceae.[1][2][3][4]

Phylogeny

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[1] and National Center for Biotechnology Information (NCBI).[5]

16S rRNA based LTP_10_2024[6][7][8] 120 marker proteins based GTDB 09-RS220[9][10][11]
Pontibacillus
 
 

P. halophilus Chen et al. 2009

 
 

P. litoralis Chen et al. 2010

 
 
 
 
 

P. salicampi Lee et al. 2015

 
 

P. yanchengensis Yang et al. 2011

 
 
 
 

P. marinus Lim et al. 2005

 
 
 

P. chungwhensis Lim et al. 2005

 
 

P. salipaludis Sultanpuram et al. 2016

 
 
 
 
 
Pontibacillus
 

P. halophilus

 
 
 
 

P. litoralis

 
 

P. yanchengensis

 
 
 
 

P. marinus

 
 
 

P. chungwhensis

 
 

P. salipaludis

 
 
 
 
 

See also

References

  1. ↑ 1.0 1.1 J.P. Euzéby. "Pontibacillus". List of Prokaryotic names with Standing in Nomenclature (LPSN). https://lpsn.dsmz.de/genus/pontibacillus. 
  2. ↑ (in en) Pontibacillus. https://www.uniprot.org/taxonomy/289201. 
  3. ↑ Parker, Charles Thomas; Wigley, Sarah; Garrity, George M; Taylor, Dorothea (2009). "Nomenclature Abstract for Pontibacillus Lim et al. 2005 emend. Chen et al. 2010." (in en). The NamesforLife Abstracts. doi:10.1601/nm.8784. 
  4. ↑ Vos, Paul De (2015). "Pontibacillus" (in en). Pontibacillus. John Wiley & Sons, Ltd. 1–4. doi:10.1002/9781118960608.gbm00541. ISBN 9781118960608. 
  5. ↑ Sayers. "Pontibacillus". National Center for Biotechnology Information (NCBI) taxonomy database. https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Undef&id=289201&lvl=3&p=has_linkout&p=blast_url&p=genome_blast&lin=f&keep=1&srchmode=2&unlock. 
  6. ↑ "The LTP". https://imedea.uib-csic.es/mmg/ltp/#LTP. 
  7. ↑ "LTP_all tree in newick format". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_all_10_2024.ntree. 
  8. ↑ "LTP_10_2024 Release Notes". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_10_2024_release_notes.pdf. 
  9. ↑ "GTDB release 09-RS220". https://gtdb.ecogenomic.org/about#4%7C. 
  10. ↑ "bac120_r220.sp_labels". https://data.gtdb.ecogenomic.org/releases/release220/220.0/auxillary_files/bac120_r220.sp_labels.tree. 
  11. ↑ "Taxon History". https://gtdb.ecogenomic.org/taxon_history/. 

Further reading

  • Lim, JM; Jeon, CO; Song, SM; Kim, CJ (January 2005). "Pontibacillus chungwhensis gen. nov., sp. nov., a moderately halophilic Gram-positive bacterium from a solar saltern in Korea.". International Journal of Systematic and Evolutionary Microbiology 55 (Pt 1): 165–70. doi:10.1099/ijs.0.63315-0. PMID 15653871. 
  • Yang, Y; Zou, Z; He, M; Wang, G (August 2011). "Pontibacillus yanchengensis sp. nov., a moderately halophilic bacterium isolated from salt field soil.". International Journal of Systematic and Evolutionary Microbiology 61 (Pt 8): 1906–11. doi:10.1099/ijs.0.023911-0. PMID 20833883. 
  • Lee, JC; Kim, YS; Yun, BS; Whang, KS (February 2015). "Pontibacillus salicampi sp. nov., a moderately halophilic bacterium isolated from saltern soil.". International Journal of Systematic and Evolutionary Microbiology 65 (Pt 2): 375–80. doi:10.1099/ijs.0.066423-0. PMID 25368138. 
  • Lim, JM; Jeon, CO; Park, DJ; Kim, HR; Yoon, BJ; Kim, CJ (May 2005). "Pontibacillus marinus sp. nov., a moderately halophilic bacterium from a solar saltern, and emended description of the genus Pontibacillus.". International Journal of Systematic and Evolutionary Microbiology 55 (Pt 3): 1027–31. doi:10.1099/ijs.0.63489-0. PMID 15879229. 

Wikidata ☰ Q26271250 entry



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