Biology:Proteiniclasticum

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Proteiniclasticum is a strictly anaerobic and proteolytic genus of bacteria from the family of Clostridiaceae with one known species (Proteiniclasticum ruminis).[1][2][3][4] Proteiniclasticum ruminis has been isolated from the content of a yak rumen.[4]

Phylogeny

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[1] and National Center for Biotechnology Information (NCBI)[5]

16S rRNA based LTP_10_2024[6][7][8] 120 marker proteins based GTDB 09-RS220[9][10][11]
Proteiniclasticum
 

P. aestuarii

 
 

P. ruminis

 
 
Proteiniclasticum
 

"P. sediminis" Liu et al. 2021

 
 
 

P. aestuarii Namirimu et al. 2022

 
 

P. ruminis Zhang, Song & Dong 2010

 
 
 

See also

References

  1. ↑ 1.0 1.1 J.P. Euzéby. "Proteiniclasticum". List of Prokaryotic names with Standing in Nomenclature (LPSN). https://lpsn.dsmz.de/genus/proteiniclasticum. 
  2. ↑ Proteiniclasticum. https://www.uniprot.org/taxonomy/1155385. 
  3. ↑ Parker, Charles Thomas; Mannor, Kara; Garrity, George M. (2010). Parker, Charles Thomas; Garrity, George M. eds. Taxonomy of the genus Proteiniclasticum Zhang et al. 2010. doi:10.1601/tx.20095. 
  4. ↑ 4.0 4.1 Zhang, Kegui; Song, Lei; Dong, Xiuzhu (1 September 2010). "Proteiniclasticum ruminis gen. nov., sp. nov., a strictly anaerobic proteolytic bacterium isolated from yak rumen". International Journal of Systematic and Evolutionary Microbiology 60 (9): 2221–2225. doi:10.1099/ijs.0.011759-0. PMID 19915115. 
  5. ↑ Sayers. "Proteiniclasticum". National Center for Biotechnology Information (NCBI) taxonomy database. https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Undef&id=1155385&lvl=3&keep=1&srchmode=1&unlock. 
  6. ↑ "The LTP". https://imedea.uib-csic.es/mmg/ltp/#LTP. 
  7. ↑ "LTP_all tree in newick format". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_all_10_2024.ntree. 
  8. ↑ "LTP_10_2024 Release Notes". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_10_2024_release_notes.pdf. 
  9. ↑ "GTDB release 09-RS220". https://gtdb.ecogenomic.org/about#4%7C. 
  10. ↑ "bac120_r220.sp_labels". https://data.gtdb.ecogenomic.org/releases/release220/220.0/auxillary_files/bac120_r220.sp_labels.tree. 
  11. ↑ "Taxon History". https://gtdb.ecogenomic.org/taxon_history/. 

Wikidata ☰ Q26275262 entry



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