Biology:Pseudodesulfovibrio

From HandWiki

Pseudodesulfovibrio is a bacterium genus in the family Desulfovibrionaceae.[1]

Phylogeny

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[1] and National Center for Biotechnology Information (NCBI)[2]

16S rRNA based LTP_10_2024[3][4][5] 120 marker proteins based GTDB 09-RS220[6][7][8]
Pseudodesulfovibrio
 
 

P. tunisiensis (Ben Ali Gam et al. 2009) Waite et al. 2020

 
 
 

P. senegalensis (Thioye et al. 2017) Galushko and Kuever 2021

 
 
 

P. halophilus (Caumette et al. 1991) Waite et al. 2020

 
 

"P. oxyclinae" (Krekeler et al. 2000) Galushko & Kuever 2019

 
 
 
 
 
 
 

P. aespoeensis (Motamedi and Pedersen 1998) Cao et al. 2016

 
 

P. alkaliphilus Frolova et al. 2022

 
 
 
 
 

P. piezophilus (Khelaifia et al. 2011) Cao et al. 2016

 
 

P. profundus (Bale et al. 1997) Cao et al. 2016

 
 
 
 

P. portus (Suzuki et al. 2010) Cao et al. 2016

 
 
 
 

P. nedwellii Kondo 2023

 
 

P. sediminis Takahashi et al. 2022

 
 
 
 

P. mercurii Gilmour et al. 2021

 
 
 

P. indicus Cao et al. 2016

 
 
 

P. hydrargyri Ranchou-Peyruse et al. 2018

 
 

"P. dechloracetivorans" Sun et al. 2000 ex Galushko & Kuever 2019

 
 
 
 
 
 
 
 
 
Pseudodesulfovibrio
 
 
 

"Paradesulfovibrio onnuriensis" Kim et al. 2020

 
 

P. senegalensis

 
 
 
 

"P. brasiliensis" Warthmann et al. 2005 ex Waite et al. 2020

 
 

"P. oxyclinae"

 
 
 
 
 

P. tunisiensis

 
 
 
 
 

P. aespoeensis

 
 

P. alkaliphilus

 
 
 
 

"P. cashew" Zheng et al. 2021

 
 
 

P. piezophilus

 
 

P. profundus

 
 
 
 
 
 
 

P. sediminis

 
 
 

P. nedwellii

 
 

P. portus

 
 
 
 
 

P. indicus

 
 
 

P. hydrargyri

 
 

P. mercurii

 
 
 
 
 
 
 

Species incertae sedis:

  • "P. karagichevae" Bidzhieva et al. 2024
  • "P. pelocollis" Slobodkina et al. 2024
  • "P. thermohalotolerans" Gaikwad et al. 2023

See also

References

  1. ↑ 1.0 1.1 A.C. Parte. "Pseudodesulfovibrio". List of Prokaryotic names with Standing in Nomenclature (LPSN). https://lpsn.dsmz.de/genus/pseudodesulfovibrio. 
  2. ↑ Sayers. "Pseudodesulfovibrio". National Center for Biotechnology Information (NCBI) taxonomy database. https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Tree&id=2035811&lvl=3&lin=f&keep=1&srchmode=1&unlock. 
  3. ↑ "The LTP". https://imedea.uib-csic.es/mmg/ltp/#LTP. 
  4. ↑ "LTP_all tree in newick format". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_all_10_2024.ntree. 
  5. ↑ "LTP_10_2024 Release Notes". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_10_2024_release_notes.pdf. 
  6. ↑ "GTDB release 09-RS220". https://gtdb.ecogenomic.org/about#4%7C. 
  7. ↑ "bac120_r220.sp_labels". https://data.gtdb.ecogenomic.org/releases/release220/220.0/auxillary_files/bac120_r220.sp_labels.tree. 
  8. ↑ "Taxon History". https://gtdb.ecogenomic.org/taxon_history/. 

Wikidata ☰ Q29566654 entry



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