Biology:Pseudoramibacter

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Pseudoramibacter is a Gram-positive, strictly anaerobic, non-spore-forming and non-motile bacterial genus from the family of Eubacteriaceae with one known species (Pseudoramibacter alactolyticus).[1][2][3][4] Pseudoramibacter bacteria occur in birds.[4] Pseudoramibacter alactolyticus is associated with endodontic infections.[5][6][7]

Phylogeny

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[2] and National Center for Biotechnology Information (NCBI)[8]

16S rRNA based LTP_10_2024[9][10][11] 120 marker proteins based GTDB 09-RS220[12][13][14]
Pseudoramibacter

P. alactolyticus

"P. porci"

Pseudoramibacter

P. alactolyticus (Prévot & Taffanel 1942) Willems & Collins 1996

"Ca. P. fermentans" Scarborough et al. 2020

"P. porci" Wylensek et al. 2020

See also

References

  1. Berman, Jules J. (2012) (in en). Taxonomic Guide to Infectious Diseases: Understanding the Biologic Classes of Pathogenic Organisms. Academic Press. ISBN 9780124159136. 
  2. 2.0 2.1 J.P. Euzéby. "Pseudoramibacter". List of Prokaryotic names with Standing in Nomenclature (LPSN). https://lpsn.dsmz.de/genus/pseudoramibacter. 
  3. Parker, Charles Thomas; Garrity, George M (2008). Parker, Charles Thomas; Garrity, George M. eds. "Nomenclature Abstract for Pseudoramibacter Willems and Collins 1996." (in en). The NamesforLife Abstracts. doi:10.1601/nm.4301. 
  4. 4.0 4.1 Willems, Anne; Collins, Matthew D. (2015). "Pseudoramibacter" (in en). Bergey's Manual of Systematics of Archaea and Bacteria. John Wiley & Sons, Ltd. pp. 1–8. doi:10.1002/9781118960608.gbm00631. ISBN 9781118960608. 
  5. Torabinejad, Mahmoud; Fouad, Ashraf; Walton, Richard E. (2014) (in en). Endodontics - E-Book: Principles and Practice. Elsevier Health Sciences. ISBN 9781455754090. 
  6. Siqueira JF, Jr; Rôças, IN (November 2003). "Pseudoramibacter alactolyticus in primary endodontic infections.". Journal of Endodontics 29 (11): 735–8. doi:10.1097/00004770-200311000-00012. PMID 14651280. 
  7. Carrilho, M. Rocha de Olivera (2017) (in en). Root Caries: From Prevalence to Therapy. Karger Medical and Scientific Publishers. ISBN 9783318061130. 
  8. Sayers. "Pseudoramibacter". National Center for Biotechnology Information (NCBI) taxonomy database. https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Tree&id=113286&lvl=3&lin=f&keep=1&srchmode=1&unlock. 
  9. "The LTP". https://imedea.uib-csic.es/mmg/ltp/#LTP. 
  10. "LTP_all tree in newick format". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_all_10_2024.ntree. 
  11. "LTP_10_2024 Release Notes". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_10_2024_release_notes.pdf. 
  12. "GTDB release 09-RS220". https://gtdb.ecogenomic.org/about#4%7C. 
  13. "bac120_r220.sp_labels". https://data.gtdb.ecogenomic.org/releases/release220/220.0/auxillary_files/bac120_r220.sp_labels.tree. 
  14. "Taxon History". https://gtdb.ecogenomic.org/taxon_history/. 

Further reading

Wikidata ☰ Q3924921 entry