Biology:Rubinisphaera

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Rubinisphaera is a genus of bacteria from the family of Planctomycetaceae with two known species.[1][2] Rubinisphaera brasiliensis has been isolated from water from the Lagoa Vermelha from Brazil.[3][4]

Phylogeny

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[1] and National Center for Biotechnology Information (NCBI).[5]

16S rRNA based LTP_10_2024[6][7][8] 120 marker proteins based GTDB 10-RS226[9][10][11]
Rubinisphaera
 

R. brasiliensis

 
 
 

R. italica

 
 

R. margarita

 
 
 
Rubinisphaera
 

R. brasiliensis (Schlesner 1990) Scheuner et al. 2015

 
 
 

R. italica Kallscheuer et al. 2021

 
 

R. margarita Vitorino et al. 2022

 
 
 

See also

References

  1. ↑ 1.0 1.1 Rubinisphaera in LPSN; Freese, H. M.; Meier-Kolthoff, J. P.; Sardà Carbasse, J.; Afolayan, A. O.; Göker, M. (29 October 2025). "TYGS and LPSN in 2025: a Global Core Biodata Resource for genome-based classification and nomenclature of prokaryotes within DSMZ Digital Diversity". Nucleic Acids Research 53: D1–D12. doi:10.1093/nar/gkaf1110. 
  2. ↑ (in en) Rubinisphaera. https://www.uniprot.org/taxonomy/1649490. 
  3. ↑ (in en) Details: DSM-5305. https://www.dsmz.de/catalogues/details/culture/DSM-5305.html. 
  4. ↑ Scheuner, C; Tindall, BJ; Lu, M; Nolan, M; Lapidus, A; Cheng, JF; Goodwin, L; Pitluck, S et al. (2014). "Complete genome sequence of Planctomyces brasiliensis type strain (DSM 5305(T)), phylogenomic analysis and reclassification of Planctomycetes including the descriptions of Gimesia gen. nov., Planctopirus gen. nov. and Rubinisphaera gen. nov. and emended descriptions of the order Planctomycetales and the family Planctomycetaceae.". Standards in Genomic Sciences 9: 10. doi:10.1186/1944-3277-9-10. PMID 25780503. 
  5. ↑ Schoch CL. "Rubinisphaera". National Center for Biotechnology Information (NCBI) taxonomy database. https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?command=show&mode=tree&id=1649490&lvl=3. Retrieved 2025-06-05. 
  6. ↑ "The LTP". https://imedea.uib-csic.es/mmg/ltp/#LTP. 
  7. ↑ "LTP_all tree in newick format". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_all_10_2024.ntree. 
  8. ↑ "LTP_10_2024 Release Notes". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_10_2024_release_notes.pdf. 
  9. ↑ "GTDB release 10-RS226". https://gtdb.ecogenomic.org/about#4%7C. 
  10. ↑ "bac120_r226.sp_label". https://data.gtdb.ecogenomic.org/releases/release226/226.0/auxillary_files/bac120_r226.sp_labels.tree. 
  11. ↑ "Taxon History". https://gtdb.ecogenomic.org/taxon_history/. 

Wikidata ☰ Q26282693 entry



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