Biology:Rubinisphaera

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Short description: Genus of bacteria

Rubinisphaera
Scientific classification
Domain:
Bacteria
Phylum:
Planctomycetota
Class:
Planctomycetia
Order:
Planctomycetales
Family:
Planctomycetaceae
Genus:
Rubinisphaera

Scheuner et al. 2015[1]
Type species
Rubinisphaera brasiliensis
(Schlesner 1990) Scheuner et al. 2015
Species
  • R. brasiliensis
  • R. italica
  • R. margarita

Rubinisphaera is a genus of bacteria from the family of Planctomycetaceae with two known species.[1][2] Rubinisphaera brasiliensis has been isolated from water from the Lagoa Vermelha from Brazil .[3][4]

Phylogeny

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[5] and National Center for Biotechnology Information (NCBI)[6]

16S rRNA based LTP_08_2023[7][8][9] 120 marker proteins based GTDB 08-RS214[10][11][12]
Rubinisphaera
 

R. margarita

 
 
 

R. brasiliensis

 
 

R. italica

 
 
 
Rubinisphaera
 

R. brasiliensis (Schlesner 1990) Scheuner et al. 2015

 
 
 

R. italica Kallscheuer et al. 2021

 
 

R. margarita Vitorino et al. 2022

 
 
 

See also

References

  1. ↑ 1.0 1.1 Parte, A.C.. "Rubinisphaera". LPSN. https://lpsn.dsmz.de/genus/rubinisphaera. 
  2. ↑ (in en) Rubinisphaera. https://www.uniprot.org/taxonomy/1649490. 
  3. ↑ (in en) Details: DSM-5305. https://www.dsmz.de/catalogues/details/culture/DSM-5305.html. 
  4. ↑ Scheuner, C; Tindall, BJ; Lu, M; Nolan, M; Lapidus, A; Cheng, JF; Goodwin, L; Pitluck, S et al. (2014). "Complete genome sequence of Planctomyces brasiliensis type strain (DSM 5305(T)), phylogenomic analysis and reclassification of Planctomycetes including the descriptions of Gimesia gen. nov., Planctopirus gen. nov. and Rubinisphaera gen. nov. and emended descriptions of the order Planctomycetales and the family Planctomycetaceae.". Standards in Genomic Sciences 9: 10. doi:10.1186/1944-3277-9-10. PMID 25780503. 
  5. ↑ A.C. Parte. "Rubinisphaera". List of Prokaryotic names with Standing in Nomenclature (LPSN). https://lpsn.dsmz.de/genus/Rubinisphaera. 
  6. ↑ Sayers. "Rubinisphaera". National Center for Biotechnology Information (NCBI) taxonomy database. https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Tree&id=1649490&lvl=3&lin=f&keep=1&srchmode=1&unlock. 
  7. ↑ "The LTP". https://imedea.uib-csic.es/mmg/ltp/#LTP. 
  8. ↑ "LTP_all tree in newick format". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_all_08_2023.ntree. 
  9. ↑ "LTP_08_2023 Release Notes". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_08_2023_release_notes.pdf. 
  10. ↑ "GTDB release 08-RS214". https://gtdb.ecogenomic.org/about#4%7C. 
  11. ↑ "bac120_r214.sp_label". https://data.gtdb.ecogenomic.org/releases/release214/214.0/auxillary_files/bac120_r214.sp_labels.tree. 
  12. ↑ "Taxon History". https://gtdb.ecogenomic.org/taxon_history/. 

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Wikidata ☰ Q26282693 entry



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