Biology:Rubrobacter

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Short description: Genus of bacteria


Rubrobacter
Scientific classification
Domain:
Phylum:
Class:
Order:
Rubrobacterales

Rainey et al. 1997[1]
Family:
Rubrobacteraceae

Rainey et al. 1997[1]
Genus:
Rubrobacter

Suzuki et al. 1989[2]
Type species
Rubrobacter radiotolerans
(Yoshinaka, Yano & Yamaguchi 1973) Suzuki et al. 1989
Species[3]

See text

Rubrobacter is a genus of Actinomycetota.[1][2] It is radiotolerant and may rival Deinococcus radiodurans in this regard.[4]

Phylogeny

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[5] and National Center for Biotechnology Information (NCBI).[6]

16S rRNA based LTP_08_2023[7][8][9] 120 marker proteins based GTDB 08-RS214[10][11][12]
Rubrobacter

R. xylanophilus Carreto et al. 1996

R. calidifluminis Albuquerque et al. 2014

R. naiadicus Albuquerque et al. 2014

R. taiwanensis Chen et al. 2004

R. spartanus Norman et al. 2017

R. marinus Chen et al. 2020

R. tropicus Chen et al. 2020

R. aplysinae Kämpfer et al. 2014

R. bracarensis Jurado et al. 2013

R. indicoceani Chen et al. 2018

R. radiotolerans (Yoshinaka, Yano & Yamaguchi 1973) Suzuki et al. 1989

Incertae sedis:

  • "R. wessexii"
Rubrobacter

R. taiwanensis

R. xylanophilus

R. aplysinae

R. tropicus

R. indicoceani

R. radiotolerans

See also

References

  1. 1.0 1.1 1.2 "Proposal for a new hierarchic classification system, Actinobacteria classis nov.". Int. J. Syst. Bacteriol. 47 (2): 479–491. 1997. doi:10.1099/00207713-47-2-479. 
  2. 2.0 2.1 "Chemotaxonomic characterization of a radiotolerant bacterium Arthrobacter radiotolerans: Description of Rubrobacter radiotolerans gen. nov., comb. nov.". FEMS Microbiol. Lett. 52 (1–2): 33–39. 1988. doi:10.1111/j.1574-6968.1988.tb02568.x. 
  3. "Rubrobacter". List of Prokaryotic names with Standing in Nomenclature (LPSN). https://lpsn.dsmz.de/genus/rubrobacter. 
  4. "Rubrobacter taiwanensis sp. nov., a novel thermophilic, radiation-resistant species isolated from hot springs". Int. J. Syst. Evol. Microbiol. 54 (Pt 5): 1849–55. 2004. doi:10.1099/ijs.0.63109-0. PMID 15388754. http://ntur.lib.ntu.edu.tw//bitstream/246246/162096/1/10.pdf. 
  5. "Rubrobacteria". https://lpsn.dsmz.de/class/rubrobacteria. 
  6. Sayers. "Rubrobacteria". National Center for Biotechnology Information (NCBI) taxonomy database. https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Undef&id=84995&lvl=3&lin=f&keep=1&srchmode=1&unlock. 
  7. "The LTP". https://imedea.uib-csic.es/mmg/ltp/#LTP. 
  8. "LTP_all tree in newick format". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_all_08_2023.ntree. 
  9. "LTP_08_2023 Release Notes". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_08_2023_release_notes.pdf. 
  10. "GTDB release 08-RS214". https://gtdb.ecogenomic.org/about#4%7C. 
  11. "bac120_r214.sp_label". https://data.gtdb.ecogenomic.org/releases/release214/214.0/auxillary_files/bac120_r214.sp_labels.tree. 
  12. "Taxon History". https://gtdb.ecogenomic.org/taxon_history/. 

External links

Wikidata ☰ Q873931 entry