Biology:Syntrophus

From HandWiki

Syntrophus is a Gram negative bacterial genus from the family of Syntrophaceae.[1][2][3]

Phylogeny

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[1] and National Center for Biotechnology Information (NCBI).[4]

16S rRNA based LTP_10_2024[5][6][7] 120 marker proteins based GTDB 10-RS226[8][9][10]
Syntrophus

S. aciditrophicus Jackson et al. 2015

S. buswellii Mountfort et al. 1984

S. gentianae Wallrabenstein et al. 1996

Syntrophus

S. aciditrophicus

S. gentianae

See also

References

  1. 1.0 1.1 Syntrophus in LPSN; Freese, H. M.; Meier-Kolthoff, J. P.; Sardà Carbasse, J.; Afolayan, A. O.; Göker, M. (29 October 2025). "TYGS and LPSN in 2025: a Global Core Biodata Resource for genome-based classification and nomenclature of prokaryotes within DSMZ Digital Diversity". Nucleic Acids Research 53: D1–D12. doi:10.1093/nar/gkaf1110. 
  2. UniProt
  3. Kuever, Jan; Schink, Bernhard (1 January 2015). "Syntrophus" (in en). Bergey's Manual of Systematics of Archaea and Bacteria. John Wiley & Sons, Ltd. pp. 1–5. doi:10.1002/9781118960608.gbm01064. ISBN 9781118960608. 
  4. Schoch CL. "Syntrophus". National Center for Biotechnology Information (NCBI) taxonomy database. https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?command=show&mode=tree&id=43773&lvl=3. Retrieved 2025-06-05. 
  5. "The LTP". https://imedea.uib-csic.es/mmg/ltp/#LTP. 
  6. "LTP_all tree in newick format". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_all_10_2024.ntree. 
  7. "LTP_10_2024 Release Notes". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_10_2024_release_notes.pdf. 
  8. "GTDB release 10-RS226". https://gtdb.ecogenomic.org/about#4%7C. 
  9. "bac120_r226.sp_label". https://data.gtdb.ecogenomic.org/releases/release226/226.0/auxillary_files/bac120_r226.sp_labels.tree. 
  10. "Taxon History". https://gtdb.ecogenomic.org/taxon_history/. 

Further reading

Wikidata ☰ Q19684421 entry