Biology:Thermofilaceae

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Thermofilaceae are a family of archaea in the order Thermofilales.[1][2]

Taxonomy

Taxonomy from List of Prokaryotic names with Standing in Nomenclature (LPSN)[3] and National Center for Biotechnology Information (NCBI).[1]

16S rRNA based LTP_07_2026[4][5][6] 53 marker proteins based GTDB 11-RS232[7][8][9]
 
Infirmifilum
 

I. lucidum Zayulina et al. 2024

 
 

I. uzonense (Toshchakov et al. 2016) Zayulina et al. 2024

 
 
Thermofilum
 

T. adornatum Zayulina et al. 2020

 
 

T. pendens Zillig & Gierl 1983

 
 
 
 
Infirmifilum
 

I. lucidum

 
 

I. uzonense

 
 
Thermofilum
 

T. adornatum

 
 

T. pendens

 
 
 

See also

References

  1. ↑ 1.0 1.1 C.L. Schoch. "Thermofilaceae". National Center for Biotechnology Information (NCBI) taxonomy database. https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?command=show&mode=tree&id=114378&lvl=3. 
  2. ↑ Zayulina, Kseniya S.; Elcheninov, Alexander G.; Toshchakov, Stepan V.; Kochetkova, Tatiana V.; Novikov, Andrei A.; Blamey, Jenny M.; Kublanov, Ilya V. (2021-07-01). "Novel hyperthermophilic crenarchaeon Infirmifilum lucidum gen. nov. sp. nov., reclassification of Thermofilum uzonense as Infirmifilum uzonense comb. nov. and assignment of the family Thermofilaceae to the order Thermofilales ord. nov.". Systematic and Applied Microbiology 44 (4). doi:10.1016/j.syapm.2021.126230. ISSN 0723-2020. https://www.sciencedirect.com/science/article/pii/S0723202021000539. 
  3. ↑ Thermofilaceae in LPSN; Freese, H. M.; Meier-Kolthoff, J. P.; Sardà Carbasse, J.; Afolayan, A. O.; Göker, M. (29 October 2025). "TYGS and LPSN in 2025: a Global Core Biodata Resource for genome-based classification and nomenclature of prokaryotes within DSMZ Digital Diversity". Nucleic Acids Research 53: D1–D12. doi:10.1093/nar/gkaf1110. 
  4. ↑ "The LTPlus". https://bioinfo.uib.es/ltp/#LTPlus. 
  5. ↑ "LTP_all tree in newick format". https://biocom.uib.es/opucheck-backend/api/releases/07_26_04. 
  6. ↑ Rossello-Mora, Ramon; Viver, Tomeu; Palmer-Rodríguez, Pere; Westram, Ralf; Bustos-Caparros, Esteban; Gago, Joan Francisco; Gonzalez-Mendez, Jaime; Llabrés, Mercè et al. (22 April 2026). "A pipeline for improved 16S rRNA gene-based phylogeny and diversity analyses of Bacteria and Archaea" (in en). Nature Portfolio. doi:10.21203/rs.3.rs-9370187/v1. https://doi.org/10.21203/rs.3.rs-9370187/v1. 
  7. ↑ "GTDB release 11-RS232". https://gtdb.ecogenomic.org/about#4%7C. 
  8. ↑ "ar53_r232.sp_label". https://data.gtdb.ecogenomic.org/releases/release232/232.0/auxillary_files/ar53_r232.sp_labels.tree. 
  9. ↑ "Taxon History". https://gtdb.ecogenomic.org/taxon_history/. 

Further reading

  • Judicial Commission of the International Committee on Systematics of Prokaryotes (2005). "The nomenclatural types of the orders Acholeplasmatales, Halanaerobiales, Halobacteriales, Methanobacteriales, Methanococcales, Methanomicrobiales, Planctomycetales, Prochlorales, Sulfolobales, Thermococcales, Thermoproteales and Verrucomicrobiales are the genera Acholeplasma, Halanaerobium, Halobacterium, Methanobacterium, Methanococcus, Methanomicrobium, Planctomyces, Prochloron, Sulfolobus, Thermococcus, Thermoproteus and Verrucomicrobium, respectively. Opinion 79". Int. J. Syst. Evol. Microbiol. 55 (Pt 1): 517–518. doi:10.1099/ijs.0.63548-0. PMID 15653928. 
  • Burggraf S; Huber H; Stetter KO (1997). "Reclassification of the crenarchael orders and families in accordance with 16S rRNA sequence data". Int. J. Syst. Bacteriol. 47 (3): 657–660. doi:10.1099/00207713-47-3-657. PMID 9226896. 
  • Zillig W; Stetter KO; Schafer W; Janekovic D; Wunderl S; Holz I et al. (1981). "Thermoproteales: a novel type of extremely thermoacidophilic anaerobic archaebacteria isolated from Icelandic solfataras". Zentralbl. Mikrobiol. Parasitenkd. Infektionskr. Hyg. Abt. 1 Orig. C2: 205–227. 
  • Zillig W; Tu J; Holz I (1981). "Thermoproteales--a third order of thermoacidophilic archaebacteria". Nature 293 (5827): 85–86. doi:10.1038/293085a0. PMID 6791033. Bibcode: 1981Natur.293...85Z. 

Wikidata ☰ Q5149634 entry