Biology:Erysipelotrichia

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Short description: Class of bacteria

Erysipelotrichia
Diseases of Swine 31-1.png
Cellular and colonial morphology of Erysipelothrix rhusiopathiae. Upper row: ×1200, crystal violet; lower row: ×32
Scientific classification e
Domain: Bacteria
Phylum: Bacillota
Class: Erysipelotrichia
Ludwig et al. 2010
Order: Erysipelotrichales
Ludwig et al. 2010
Families

The Erysipelotrichia are a class of bacteria of the phylum Bacillota. Species of this class are known to be common in the gut microbiome, as they have been isolated from swine manure[1] and increase in composition of the mouse gut microbiome for mice switched to diets high in fat.[2]

Phylogeny

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[3] and National Center for Biotechnology Information (NCBI)[4]

16S rRNA based LTP_08_2023[5][6][7] 120 marker proteins based GTDB 08-RS214[8][9][10]
Bacilliia

other

"Lottiidibacillaceae"

Lottiidibacillus

Culicoidibacteraceae

Culicoidibacter

Haloplasmataceae

Haloplasma

Turicibacteraceae ♦

Turicibacter

other

Fusobacteriota
Fusobacteriia

Fusobacteriales

Mycoplasmatota

Asteroleplasma

Coprobacillaceae

Erysipelotrichales ♦

Erysipelotrichaceae

Acholeplasmatales

(incl. Anaeroplasmatales)

Mycoplasmatales (incl. Entomoplasmatales)

Bacilliia

other

"Staphylococcales"

"Erysipelotrichidae"
Culicoidibacterales
Culicoidibacteraceae

Culicoidibacter

Haloplasmatales
Turicibacteraceae

Turicibacter

Haloplasmataceae

Haloplasma

"Bathyoplasmales"
"Bathyoplasmaceae"

"Ca. Bathoplasma" [MAG-NZ]

"Izemoplasmatales"

Acholeplasmatales (incl. Anaeroplasmatales)

"Aphodocolales"

"Aphodocolaceae" [RF39]

RFN20

Erysipelotrichales ♦

Coprobacillaceae

Erysipelotrichaceae

Mycoplasmatales (incl. Entomoplasmatales)

Lactobacillales

♦ Paraphyletic Erysipelotrichia

See also

References

  1. Han, Il; Congeevaram, Shankar; Ki, Dong-Won; Oh, Byoung-Taek; Park, Joonhong (5 October 2010). "Bacterial community analysis of swine manure treated with autothermal thermophilic aerobic digestion". Applied Microbiology and Biotechnology 89 (3): 835–842. doi:10.1007/s00253-010-2893-8. PMID 20922382. 
  2. Greiner, Thomas; Bäckhed, Fredrik (2011). "Effects of the gut microbiota on obesity and glucose homeostasis". Trends in Endocrinology & Metabolism 22 (4): 117–123. doi:10.1016/j.tem.2011.01.002. PMID 21353592. 
  3. J.P. Euzéby. "Erysipelotrichia". List of Prokaryotic names with Standing in Nomenclature (LPSN). https://lpsn.dsmz.de/class/erysipelotrichia. 
  4. Sayers. "Erysipelotrichia". National Center for Biotechnology Information (NCBI) taxonomy database. https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Undef&id=526524&lvl=9&lin. 
  5. "The LTP". https://imedea.uib-csic.es/mmg/ltp/#LTP. 
  6. "LTP_all tree in newick format". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_all_08_2023.ntree. 
  7. "LTP_08_2023 Release Notes". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_08_2023_release_notes.pdf. 
  8. "GTDB release 08-RS214". https://gtdb.ecogenomic.org/about#4%7C. 
  9. "bac120_r214.sp_label". https://data.gtdb.ecogenomic.org/releases/release214/214.0/auxillary_files/bac120_r214.sp_labels.tree. 
  10. "Taxon History". https://gtdb.ecogenomic.org/taxon_history/. 

External links

Wikidata ☰ Q5396370 entry