Biology:Eubacterium
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Eubacterium is a genus of anaerobic, Gram positive bacteria that forms part of the human gut microbiome. Members of this genus are phylogenetically diverse and contribute to gut health through metabolic activities such as fermentation and the production of beneficial compounds.[1]
Phylogeny
The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[2] and National Center for Biotechnology Information (NCBI)[3]
| 16S rRNA based LTP_10_2024[4][5][6] | 120 marker proteins based GTDB 09-RS220[7][8][9] | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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| Species located elsewhere on the LTP and GTDB phylogenetic trees: | Orphaned species |
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See also
References
- ↑ Mukherjee, Arghya; Lordan, Cathy; Ross, R. Paul; Cotter, Paul D. (2020-11-09). "Gut microbes from the phylogenetically diverse genus Eubacterium and their various contributions to gut health" (in en). Gut Microbes 12 (1). doi:10.1080/19490976.2020.1802866. ISSN 1949-0976. PMC 7524325. https://www.tandfonline.com/doi/full/10.1080/19490976.2020.1802866.
- ↑ J.P. Euzéby. "Eubacterium". List of Prokaryotic names with Standing in Nomenclature (LPSN). https://lpsn.dsmz.de/genus/eubacterium.
- ↑ Sayers. "Eubacterium". National Center for Biotechnology Information (NCBI) taxonomy database. https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Tree&id=1730&lvl=3&lin=f&keep=1&srchmode=1&unlock.
- ↑ "The LTP". https://imedea.uib-csic.es/mmg/ltp/#LTP.
- ↑ "LTP_all tree in newick format". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_all_10_2024.ntree.
- ↑ "LTP_10_2024 Release Notes". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_10_2024_release_notes.pdf.
- ↑ "GTDB release 09-RS220". https://gtdb.ecogenomic.org/about#4%7C.
- ↑ "bac120_r220.sp_labels". https://data.gtdb.ecogenomic.org/releases/release220/220.0/auxillary_files/bac120_r220.sp_labels.tree.
- ↑ "Taxon History". https://gtdb.ecogenomic.org/taxon_history/.
Wikidata ☰ Q5405346 entry
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