Biology:Faecalicatena

From HandWiki

Faecalicatena is a bacterial genus from the family of Lachnospiraceae.[1][2][3]

Phylogeny

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[1] and National Center for Biotechnology Information (NCBI)[4]

16S rRNA based LTP_10_2024[5][6][7] 120 marker proteins based GTDB 09-RS220[8][9][10]
 
 
 

Dorea ammoniilytica Hitch et al. 2022

 
 

Faecalicatena absiana Shin et al. 2022

 
 
 
 

Muricomes intestini Lagkouvardos et al. 2016

 
 
Faecalicatena
 
 

F. faecalis Oh et al. 2023

 
 

F. orotica (Wachsman & Barker 1954) Sakamoto, Iino & Ohkuma 2017

 
 
 
 

F. contorta (Prévot 1947) Sakamoto, Iino & Ohkuma 2017

 
 

F. fissicatena (Taylor 1972) Sakamoto, Iino & Ohkuma 2017

 
 
 
 
 
 
Muricomes
 
 

Faecalicatena faecalis

 
 

Faecalicatena orotica

 
 
 
 

M. intestini

 
 
 

Faecalicatena contorta

 
 

Faecalicatena fissicatena

 
 
 
 

See also

References

  1. ↑ 1.0 1.1 A.C. Parte. "Faecalicatena". List of Prokaryotic names with Standing in Nomenclature (LPSN). https://lpsn.dsmz.de/genus/faecalicatena. 
  2. ↑ (in en) Faecalicatena. https://www.uniprot.org/taxonomy/2005359. 
  3. ↑ Parker, Charles Thomas; Garrity, George M (2017). "Nomenclature Abstract for Faecalicatena Sakamoto et al. 2016." (in en). The NamesforLife Abstracts. doi:10.1601/nm.29879. 
  4. ↑ Sayers. "Faecalicatena". National Center for Biotechnology Information (NCBI) taxonomy database. https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Tree&id=2005359&lvl=3&lin=f&keep=1&srchmode=1&unlock. 
  5. ↑ "The LTP". https://imedea.uib-csic.es/mmg/ltp/#LTP. 
  6. ↑ "LTP_all tree in newick format". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_all_10_2024.ntree. 
  7. ↑ "LTP_10_2024 Release Notes". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_10_2024_release_notes.pdf. 
  8. ↑ "GTDB release 09-RS220". https://gtdb.ecogenomic.org/about#4%7C. 
  9. ↑ "bac120_r220.sp_labels". https://data.gtdb.ecogenomic.org/releases/release220/220.0/auxillary_files/bac120_r220.sp_labels.tree. 
  10. ↑ "Taxon History". https://gtdb.ecogenomic.org/taxon_history/. 

Further reading

  • Sakamoto, M; Iino, T; Ohkuma, M (May 2017). "Faecalimonas umbilicata gen. nov., sp. nov., isolated from human faeces, and reclassification of Eubacterium contortum, Eubacterium fissicatena and Clostridium oroticum as Faecalicatena contorta gen. nov., comb. nov., Faecalicatena fissicatena comb. nov. and Faecalicatena orotica comb. nov.". International Journal of Systematic and Evolutionary Microbiology 67 (5): 1219–1227. doi:10.1099/ijsem.0.001790. PMID 28556772. 

Wikidata ☰ Q48974020 entry



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