Biology:Halalkalibacillus

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Halalkalibacillus is a Gram-positive, rod-shaped, moderately halophilic, alkaliphilic, aerobic and motile genus of bacteria from the family of Bacillaceae with one known species (Halalkalibacillus halophilus).[1][2][3] [4]

Phylogeny

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[1] and National Center for Biotechnology Information (NCBI).[5]

16S rRNA based LTP_10_2024[6][7][8] 120 marker proteins based GTDB 09-RS220[9][10][11]

Allobacillus

Allobacillus saliphilus

Halalkalibacillus

H. halophilus Echigo et al. 2007

H. sediminis He et al. 2020

other

Halalkalibacillus sediminis

Allobacillus

Halalkalibacillus halophilus

other

See also

References

  1. 1.0 1.1 J.P. Euzéby. "Halalkalibacillus". List of Prokaryotic names with Standing in Nomenclature (LPSN). https://lpsn.dsmz.de/genus/halalkalibacillus. 
  2. (in en) Halalkalibacillus. https://www.uniprot.org/taxonomy/392825. 
  3. Parker, Charles Thomas; Garrity, George M (2008). Parker, Charles Thomas; Garrity, George M. eds. "Nomenclature Abstract for Halalkalibacillus Echigo et al. 2007" (in en). The NamesforLife Abstracts. doi:10.1601/nm.10387. 
  4. Echigo, A; Fukushima, T; Mizuki, T; Kamekura, M; Usami, R (May 2007). "Halalkalibacillus halophilus gen. nov., sp. nov., a novel moderately halophilic and alkaliphilic bacterium isolated from a non-saline soil sample in Japan.". International Journal of Systematic and Evolutionary Microbiology 57 (Pt 5): 1081–5. doi:10.1099/ijs.0.64830-0. PMID 17473263. 
  5. Sayers. "Halalkalibacillus". National Center for Biotechnology Information (NCBI) taxonomy database. https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Tree&id=392825&lvl=3&p=has_linkout&p=blast_url&p=genome_blast&lin=f&keep=1&srchmode=2&unlock. 
  6. "The LTP". https://imedea.uib-csic.es/mmg/ltp/#LTP. 
  7. "LTP_all tree in newick format". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_all_10_2024.ntree. 
  8. "LTP_10_2024 Release Notes". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_10_2024_release_notes.pdf. 
  9. "GTDB release 09-RS220". https://gtdb.ecogenomic.org/about#4%7C. 
  10. "bac120_r220.sp_labels". https://data.gtdb.ecogenomic.org/releases/release220/220.0/auxillary_files/bac120_r220.sp_labels.tree. 
  11. "Taxon History". https://gtdb.ecogenomic.org/taxon_history/. 

Wikidata ☰ Q26219643 entry