Biology:Halalkalibacillus

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Halalkalibacillus is a Gram-positive, rod-shaped, moderately halophilic, alkaliphilic, aerobic and motile genus of bacteria from the family of Bacillaceae with one known species (Halalkalibacillus halophilus).[1][2][3] [4]

Phylogeny

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[1] and National Center for Biotechnology Information (NCBI).[5]

16S rRNA based LTP_10_2024[6][7][8] 120 marker proteins based GTDB 09-RS220[9][10][11]
 
 

Allobacillus

 
 
 
 

Allobacillus saliphilus

 
 
Halalkalibacillus
 

H. halophilus Echigo et al. 2007

 
 

H. sediminis He et al. 2020

 
 
 
 
 

other

 
 
 
 
 

Halalkalibacillus sediminis

 
 
 

Allobacillus

 
 
 

Halalkalibacillus halophilus

 
 

other

 
 
 
 

See also

References

  1. ↑ 1.0 1.1 J.P. Euzéby. "Halalkalibacillus". List of Prokaryotic names with Standing in Nomenclature (LPSN). https://lpsn.dsmz.de/genus/halalkalibacillus. 
  2. ↑ (in en) Halalkalibacillus. https://www.uniprot.org/taxonomy/392825. 
  3. ↑ Parker, Charles Thomas; Garrity, George M (2008). Parker, Charles Thomas; Garrity, George M. eds. "Nomenclature Abstract for Halalkalibacillus Echigo et al. 2007" (in en). The NamesforLife Abstracts. doi:10.1601/nm.10387. 
  4. ↑ Echigo, A; Fukushima, T; Mizuki, T; Kamekura, M; Usami, R (May 2007). "Halalkalibacillus halophilus gen. nov., sp. nov., a novel moderately halophilic and alkaliphilic bacterium isolated from a non-saline soil sample in Japan.". International Journal of Systematic and Evolutionary Microbiology 57 (Pt 5): 1081–5. doi:10.1099/ijs.0.64830-0. PMID 17473263. 
  5. ↑ Sayers. "Halalkalibacillus". National Center for Biotechnology Information (NCBI) taxonomy database. https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Tree&id=392825&lvl=3&p=has_linkout&p=blast_url&p=genome_blast&lin=f&keep=1&srchmode=2&unlock. 
  6. ↑ "The LTP". https://imedea.uib-csic.es/mmg/ltp/#LTP. 
  7. ↑ "LTP_all tree in newick format". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_all_10_2024.ntree. 
  8. ↑ "LTP_10_2024 Release Notes". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_10_2024_release_notes.pdf. 
  9. ↑ "GTDB release 09-RS220". https://gtdb.ecogenomic.org/about#4%7C. 
  10. ↑ "bac120_r220.sp_labels". https://data.gtdb.ecogenomic.org/releases/release220/220.0/auxillary_files/bac120_r220.sp_labels.tree. 
  11. ↑ "Taxon History". https://gtdb.ecogenomic.org/taxon_history/. 

Wikidata ☰ Q26219643 entry