Biology:Natrinema
Natrinema (common abbreviation Nnm.) is a genus of archaeans in the family Natrialbaceae.[1]
Taxonomy
As of 2022, there are 18 species validly published in the genus Natrinema.[2]
Natrinema is related to the genus Haloterrigena, established in 1999, resulting in confusion about taxon limits and several species apparently being assigned to the wrong genus.[3] Based on phylogenomic analysis, eight species from Haloterrigena as well as Halopiger salifodinae were transferred to Natrinema in 2022.[4]
Phylogeny
The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[2] and National Center for Biotechnology Information (NCBI).[1]
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Note: Unassigned Natrinema
- "N. aidingensis" Liu et al. 2003a
- N. soli Rasooli et al. 2017
- "N. xinjiang" Habdin & Tohty 2005
See also
References
- ↑ 1.0 1.1 Sayers. "Natrinema". National Center for Biotechnology Information (NCBI) taxonomy database. https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Tree&id=88723&lvl=3&lin=f&keep=1&srchmode=1&unlock.
- ↑ 2.0 2.1 J.P. Euzéby. "Natrinema". List of Prokaryotic names with Standing in Nomenclature (LPSN). https://lpsn.dsmz.de/genus/natrinema.
- ↑ Tindall, B. J. (2003). "Taxonomic problems arising in the genera Haloterrigena and Natrinema". Int. J. Syst. Evol. Microbiol. 53 (Pt 5): 1697–1698. Published online 28 February 2003. doi:10.1099/ijs.0.02529-0. PMID 13130070.
- ↑ de la Haba, Rafael; Minegishi, Hiroaki; Kamekura, Masahiro; Shimane, Yasuhiro; Ventosa, Antonio (2021). "Phylogenomics of Haloarchaea: The Controversy of the Genera Natrinema-Haloterrigena". Frontiers in Microbiology 12. doi:10.3389/fmicb.2021.740909. PMID 34690986.
- ↑ "The LTP". https://imedea.uib-csic.es/mmg/ltp/#LTP.
- ↑ "LTP_all tree in newick format". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_all_10_2024.ntree.
- ↑ "LTP_10_2024 Release Notes". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_10_2024_release_notes.pdf.
- ↑ "GTDB release 10-RS226". https://gtdb.ecogenomic.org/about#4%7C.
- ↑ "ar53_r226.sp_label". https://data.gtdb.ecogenomic.org/releases/release226/226.0/auxillary_files/ar53_r226.sp_labels.tree.
- ↑ "Taxon History". https://gtdb.ecogenomic.org/taxon_history/.
Further reading
Scientific journals
- Xin H; Itoh T; Zhou P; Suzuki K et al. (2000). "Natrinema versiforme sp. nov., an extremely halophilic archaeon from Aibi salt lake, Xinjiang, China". Int. J. Syst. Evol. Microbiol. 50 (3): 1297–1303. doi:10.1099/00207713-50-3-1297. PMID 10843075.
- Oren A; Ventosa A (2000). "International Committee on Systematic Bacteriology Subcommittee on the taxonomy of Halobacteriaceae. Minutes of the meetings, 16 August 1999, Sydney, Australia". Int. J. Syst. Evol. Microbiol. 50 (3): 1405–1407. doi:10.1099/00207713-50-3-1405. PMID 10843089.
- McGenity TJ; Gemmell RT; Grant WD (1998). "Proposal of a new halobacterial genus Natrinema gen. nov., with two species Natrinema pellirubrum nom. nov. and Natrinema pallidum nom. nov". Int. J. Syst. Bacteriol. 48 (4): 1187–1196. doi:10.1099/00207713-48-4-1187. PMID 9828420.
- Feng, Jie; Wang, Jian; Du, Xin; Tang, Wei et al. (Mar 2014). "Proteomic Analysis of the Secretome of Haloarchaeon Natrinema sp. J7−2". Journal of Proteome Research 13 (3): 1248–1258. doi:10.1021/pr400728x. PMID 24512091. https://vpn.lib.ucdavis.edu:11006/doi/ipdf/10.1021/pr400728x.
Scientific books
- Gibbons, NE (1974). "Family V. Halobacteriaceae fam. nov.". in RE Buchanan. Bergey's Manual of Determinative Bacteriology (8th ed.). Baltimore: The Williams & Wilkins Co..
Wikidata ☰ Q6980231 entry
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