Biology:Carnobacteriaceae

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The Carnobacteriaceae are a family of Gram-positive lactic acid bacteria.[1][2][3][4][5]

Phylogeny

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[2] and National Center for Biotechnology Information (NCBI).[1]

16S rRNA based LTP_10_2024[6][7][8] 120 marker proteins based GTDB 09-RS220[9][10][11]

Aerococcaceae

Aerococcaceae~

Carnobacteriaceae~

Atopobacter

Bavariicoccus

Granulicatella

Carnobacteriaceae~1

Jeotgalibaca

Trichococcus

Carnobacteriaceae~2

Atopococcus

Lacticigenium

Allofustis

Atopostipes

Alloiococcus

Dolosigranulum

Marinilactibacillus

Alkalibacterium

Carnobacteriaceae

Desemzia

Pisciglobus

Isobaculum

Carnobacterium

Carnobacterium~

other

Aerococcaceae

Atopobacter Lawson et al. 2000

Bavariicoccus Schmidt et al. 2009

Granulicatella Collins & Lawson 2000

Jeotgalibaca Lee et al. 2014

Trichococcus Scheff, Salcher & Lingens 1984

other

Carnobacteriaceae

Atopococcus Collins et al. 2005

Lacticigenium corrig. Iino, Suzuki & Harayama 2009

Alloiococcus Aguirre & Collins 1992

Dolosigranulum Aguirre et al. 1994

Allofustis Collins et al. 2003

Atopostipes Cotta et al. 2004

Marinilactibacillus Ishikawa et al. 2003

Alkalibacterium Ntougias & Russell 2001

Desemzia Stackebrandt et al. 1999

Pisciglobus Tanasupawat et al. 2011

Isobaculum Collins et al. 2002

Carnobacterium Collins et al. 1987

Carnobacterium_A

See also

References

  1. 1.0 1.1 Sayers. "Carnobacteriaceae". National Center for Biotechnology Information (NCBI) taxonomy database. https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Tree&id=186828&lvl=3&lin=f&keep=1&srchmode=1&unlock. 
  2. 2.0 2.1 J.P. Euzéby. "Carnobacteriaceae". List of Prokaryotic names with Standing in Nomenclature (LPSN). https://lpsn.dsmz.de/family/carnobacteriaceae. 
  3. Leisner, J.J.; B.G. Laursen; H. Prévost; D. Drider; P. Dalgaard (2007). "Carnobacterium: positive and negative effects in the environment and in foods". FEMS Microbiology Reviews 31 (5): 592–613. doi:10.1111/j.1574-6976.2007.00080.x. PMID 17696886. 
  4. Gatesoupe, F.-J. (2008). "Updating the Importance of Lactic Acid Bacteria in Fish Farming: Natural Occurrence and Probiotic Treatments". Journal of Molecular Microbiology and Biotechnology 14 (1–3): 107–114. doi:10.1159/000106089. PMID 17957117. https://archimer.ifremer.fr/doc/00000/2589/. 
  5. Euzeby, Jean (2010). "List of new names and new combinations previously effectively, but not validly, published". International Journal of Systematic and Evolutionary Microbiology 60 (3): 469–472. doi:10.1099/ijs.0.022855-0. PMID 28891789. 
  6. "The LTP". https://imedea.uib-csic.es/mmg/ltp/#LTP. 
  7. "LTP_all tree in newick format". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_all_10_2024.ntree. 
  8. "LTP_10_2024 Release Notes". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_10_2024_release_notes.pdf. 
  9. "GTDB release 09-RS220". https://gtdb.ecogenomic.org/about#4%7C. 
  10. "bac120_r220.sp_labels". https://data.gtdb.ecogenomic.org/releases/release220/220.0/auxillary_files/bac120_r220.sp_labels.tree. 
  11. "Taxon History". https://gtdb.ecogenomic.org/taxon_history/. 

Wikidata ☰ Q2939805 entry