Biology:Opitutaceae

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Short description: Family of bacteria


Opitutaceae
Scientific classification
Domain:
Bacteria
Phylum:
Verrucomicrobiota
Class:
Opitutae
Order:
Opitutales
Family:
Opitutaceae

Choo et al. 2007
Species[1]

The Opitutaceae are a Gram-negative and chemoheterotrophic order of the domain Bacteria.[2][3][4] Opitutaceae bacteria were isolated from soil and coastal marine springs.[4]

Phylogeny

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[2] and National Center for Biotechnology Information (NCBI)[5]

16S rRNA based LTP_01_2022[6][7][8] 120 marker proteins based GTDB 07-RS207[9][10][11]
 
 

Oleiharenicola Rochman et al. 2018

 
 
 

Horticoccus Chung et al. 2023

 
 
 

Cephaloticoccus

 
 
 
 

Ereboglobus

 
 

Nibricoccus

 
 
 
 

Opitutus

 
 
 

Geminisphaera

 
 

Rariglobus

 
 
 
 
 
 
 
 
 

Pelagicoccus Yoon et al. 2007

 
 
 
 

"Ca. Didemniditutus" corrig. Lopera et al. 2017

 
 

"Lacunisphaera" Rast et al. 2017

 
 
 
 
 

Opitutus Chin, Liesack & Janssen 2001

 
 

Cephaloticoccus' Lin et al. 2016

 
 
 
 
 

Ereboglobus Tegtmeier et al. 2018

 
 

Nibricoccus Baek et al. 2019

 
 
 
 

Geminisphaera Wertz et al. 2017

 
 
 

Rariglobus Pitt et al. 2020

 
 

"Ca. Synoicihabitans" Murray et al. 2021

 
 
 
 
 
 
 

See also

References

  1. ↑ Opitutaceae. https://www.uniprot.org/taxonomy/134623. 
  2. ↑ 2.0 2.1 J.P. Euzéby. "Opitutaceae". List of Prokaryotic names with Standing in Nomenclature (LPSN). https://lpsn.dsmz.de/family/opitutaceae. 
  3. ↑ Parker, Charles Thomas; Garrity, George M. (2015). Taxonomy of the order Opitutales Choo et al. 2007. doi:10.1601/tx.14028. 
  4. ↑ 4.0 4.1 Parte, Aidan; Krieg, Noel R.; Ludwig, Wolfgang; Whitman, William B.; Hedlund, Brian P.; Paster, Bruce J.; Staley, James T.; Ward, Naomi et al. (4 February 2011) (in en). Bergey's Manual of Systematic Bacteriology: Volume 4: The Bacteroidetes, Spirochaetes, Tenericutes (Mollicutes), Acidobacteria, Fibrobacteres, Fusobacteria, Dictyoglomi, Gemmatimonadetes, Lentisphaerae, Verrucomicrobia, Chlamydiae, and Planctomycetes. Springer Science & Business Media. p. 820. ISBN 978-0-387-68572-4. 
  5. ↑ Sayers. "Opitutaceae". National Center for Biotechnology Information (NCBI) taxonomy database. https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Tree&id=134623&lvl=3&lin=f&keep=1&srchmode=1&unlock. 
  6. ↑ "The LTP". https://imedea.uib-csic.es/mmg/ltp/#LTP. 
  7. ↑ "LTP_all tree in newick format". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/Tree_LTP_all_01_2022.ntree. 
  8. ↑ "LTP_01_2022 Release Notes". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_01_2022_release_notes.pdf. 
  9. ↑ "GTDB release 07-RS207". https://gtdb.ecogenomic.org/about#4%7C. 
  10. ↑ "bac120_r207.sp_labels". https://data.gtdb.ecogenomic.org/releases/release207/207.0/auxillary_files/bac120_r207.sp_labels.tree. 
  11. ↑ "Taxon History". https://gtdb.ecogenomic.org/taxon_history/. 

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Wikidata ☰ Q21292485 entry



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