Biology:Marseilleviridae

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Short description: Family of viruses


Marseilleviridae
Virus classification e
(unranked): Virus
Realm: Varidnaviria
Kingdom: Bamfordvirae
Phylum: Nucleocytoviricota
Class: Megaviricetes
Order: Pimascovirales
Family: Marseilleviridae
Genera
The typical form of the virions of the Marseilleviridae is, in principle, similar to that of the Mimiviridae.

Marseilleviridae is a family of viruses first named in 2012.[1] The genomes of these viruses are double-stranded DNA. Amoeba are often hosts, but there is evidence that they are found in humans as well.[2][3][4][5] The family contains one genus and four species, two of which are unassigned to a genus.[6][7] It is a member of the nucleocytoplasmic large DNA viruses clade.

Taxonomy

The genus contains the following genera and species:[7]

  • Marseillevirus
    • Marseillevirus marseillevirus
    • Senegalvirus marseillevirus
  • Species unassigned to a genus:
    • Lausannevirus
    • Tunisvirus

Related Viruses

Images of cryo-frozen Marseilleviridae particles (left and center) and enlarged diagram of structure near a vertex. Black arrows indicate Large Dense Bodies. White arrows indicate lipid bilayer.

Additional species have since been recognized.[1] The first member of this family recognized has been named Acanthamoeba polyphaga marseillevirus. A second member is Acanthamoeba castellanii lausannevirus. Two additional viruses have been isolated but have yet to be named. Another member of this family has been isolated from blood donors.[4] An isolate from insects—Insectomime virus—has also been reported.[8]

The viruses appear to fall into at least 3 lineages: (1) Marseillevirus and Cannes8virus (2) Insectomime and Tunisvirus and (3) Lausannevirus. A sixth potential member of this family—Melbournevirus—appears to be related to the Marseillevirus/Cannes8virus clade.[9]

A seventh virus—Brazilian Marseillevirus—has been reported.[10] This virus appears to belong to a fourth lineage of virus in this family.

Another virus—Tokyovirus—has also been reported.[11]

Another member of this family is Kurlavirus.[12]

In 2017, it was proposed that the family contained the following five lineages:[13]

Lineage A

  • Cannes 8 virus
  • Marseillevirus marseillevirus
  • Marseillevirus shanghai
  • Melbournvirus
  • Senegalvirus
  • Tokyovirus

Lineage B

  • Kurlavirus
  • Lausannevirus
  • Noumeavirus
  • Port-miou virus

Lineage C

  • Insectomime virus
  • Tunisvirus

Lineage D

  • Brazilian marseillevirus

Lineage E

  • Golden marseillevirus

Another putative member of this family is Marseillevirus shanghai. If this virus is confirmed, it would belong to the A lineage.

Structure

Viruses in Marseilleviridae have icosahedral geometries. The diameter is around 250 nm. Genomes are circular, around 372kb in length. The genome has 457 open reading frames.[6]

Genus Structure Symmetry Capsid Genomic arrangement Genomic segmentation
Unassigned Head-Tail T=16 Non-enveloped Linear Monopartite
Marseillevirus Icosahedral Circular

Life cycle

DNA-templated transcription is the method of transcription. Amoeba serve as the natural host.[6]

Genus Host details Tissue tropism Entry details Release details Replication site Assembly site Transmission
Marseillevirus Amoeba None Fusion Lysis Cytoplasm Cytoplasm Diffusion in Water

Genomics

A promoter sequence—AAATATTT—has been found associated with 55% of the identified genes in this virus.[14] Most of these sequences occur in multiple copies.[citation needed]

History

One of the first members of this family was described in 2009.[15] Other members described around then (2007) and since then have been documented.[16]

References

  1. ↑ 1.0 1.1 Colson, Philippe; Pagnier, Isabelle; Yoosuf, Niyaz; Fournous, Ghislain; La Scola, Bernard; Raoult, Didier (2012). "'Marseilleviridae', a new family of giant viruses infecting amoebae". Archives of Virology 158 (4): 915–20. doi:10.1007/s00705-012-1537-y. PMID 23188494. 
  2. ↑ La Scola, Bernard (2014). "Looking at protists as a source of pathogenic viruses". Microbial Pathogenesis 77: 131–5. doi:10.1016/j.micpath.2014.09.005. PMID 25218687. 
  3. ↑ Colson, Philippe; Fancello, Laura; Gimenez, Gregory; Armougom, Fabrice; Desnues, Christelle; Fournous, Ghislain; Yoosuf, Niyaz; Million, Matthieu et al. (2013). "Evidence of the megavirome in humans". Journal of Clinical Virology 57 (3): 191–200. doi:10.1016/j.jcv.2013.03.018. PMID 23664726. 
  4. ↑ 4.0 4.1 Popgeorgiev, Nikolay; Boyer, Mickaël; Fancello, Laura; Monteil, Sonia; Robert, Catherine; Rivet, Romain; Nappez, Claude; Azza, Said et al. (2013). "Marseillevirus-Like Virus Recovered from Blood Donated by Asymptomatic Humans". The Journal of Infectious Diseases 208 (7): 1042–50. doi:10.1093/infdis/jit292. PMID 23821720. 
  5. ↑ Aherfi, Sarah; Colson, Philippe; Audoly, Gilles; Nappez, Claude; Xerri, Luc; Valensi, Audrey; Million, Matthieu; Lepidi, Hubert et al. (2016). "Marseillevirus in lymphoma: A giant in the lymph node". The Lancet Infectious Diseases 16 (10): e225–e234. doi:10.1016/S1473-3099(16)30051-2. PMID 27502174. 
  6. ↑ 6.0 6.1 6.2 "Viral Zone". ExPASy. http://viralzone.expasy.org/all_by_species/4740.html. 
  7. ↑ 7.0 7.1 "Virus Taxonomy: 2020 Release". International Committee on Taxonomy of Viruses (ICTV). March 2021. https://ictv.global/taxonomy. 
  8. ↑ Boughalmi, Mondher; Pagnier, Isabelle; Aherfi, Sarah; Colson, Philippe; Raoult, Didier; La Scola, Bernard (2013). "First Isolation of a Marseillevirus in the Diptera Syrphidae Eristalis tenax". Intervirology 56 (6): 386–94. doi:10.1159/000354560. PMID 24157885. 
  9. ↑ Doutre, G; Philippe, N; Abergel, C; Claverie, J.-M (2014). "Genome Analysis of the First Marseilleviridae Representative from Australia Indicates that Most of Its Genes Contribute to Virus Fitness". Journal of Virology 88 (24): 14340–9. doi:10.1128/JVI.02414-14. PMID 25275139. 
  10. ↑ Dornas, Fábio; Assis, Felipe; Aherfi, Sarah; Arantes, Thalita; Abrahão, Jônatas; Colson, Philippe; La Scola, Bernard (2016). "A Brazilian Marseillevirus is the Founding Member of a Lineage in Family Marseilleviridae". Viruses 8 (3): 76. doi:10.3390/v8030076. PMID 26978387. 
  11. ↑ Takemura, Masaharu (2016). "Draft Genome Sequence of Tokyovirus, a Member of the Family Marseilleviridae Isolated from the Arakawa River of Tokyo, Japan". Genome Announcements 4 (3): e00429–16. doi:10.1128/genomeA.00429-16. PMID 27284144. 
  12. ↑ Chatterjee, Anirvan; Kondabagil, Kiran (2017). "Complete genome sequence of Kurlavirus, a novel member of the family Marseilleviridae isolated in Mumbai, India". Archives of Virology 162 (10): 3243–3245. doi:10.1007/s00705-017-3469-z. PMID 28685284. 
  13. ↑ Fabre E, Jeudy S, Santini S, Legendre M, Trauchessec M, Claverie J-M, et al (2017). Noumeavirus replication relies on a transient remote control of the host nucleus. Nat Commun 8:15087
  14. ↑ Oliveira, Graziele Pereira; Lima, Maurício Teixeira; Arantes, Thalita Souza; Assis, Felipe Lopes; Rodrigues, Rodrigo Araújo Lima; Da Fonseca, Flávio Guimarães; Bonjardim, Cláudio Antônio; Kroon, Erna Geessien et al. (2017). "The Investigation of Promoter Sequences of Marseilleviruses Highlights a Remarkable Abundance of the AAATATTT Motif in Intergenic Regions". Journal of Virology 91 (21): e01088–17. doi:10.1128/JVI.01088-17. PMID 28794030. 
  15. ↑ Boyer, M; Yutin, N; Pagnier, I; Barrassi, L; Fournous, G; Espinosa, L; Robert, C; Azza, S et al. (2009). "Giant Marseillevirus highlights the role of amoebae as a melting pot in emergence of chimeric microorganisms". Proceedings of the National Academy of Sciences 106 (51): 21848–53. doi:10.1073/pnas.0911354106. PMID 20007369. Bibcode: 2009PNAS..10621848B. 
  16. ↑ Aherfi, Sarah; La Scola, Bernard; Pagnier, Isabelle; Raoult, Didier; Colson, Philippe (2014). "The expanding family Marseilleviridae". Virology 466-467: 27–37. doi:10.1016/j.virol.2014.07.014. PMID 25104553. 

External links

Wikidata ☰ Q6773274 entry



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