Biology:CAMK
| Ca2+/calmodulin-dependent protein kinase | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Identifiers | |||||||||
| EC number | 2.7.11.17 | ||||||||
| CAS number | 97350-82-8 | ||||||||
| Databases | |||||||||
| IntEnz | IntEnz view | ||||||||
| BRENDA | BRENDA entry | ||||||||
| ExPASy | NiceZyme view | ||||||||
| KEGG | KEGG entry | ||||||||
| MetaCyc | metabolic pathway | ||||||||
| PRIAM | profile | ||||||||
| PDB structures | RCSB PDB PDBe PDBsum | ||||||||
| Gene Ontology | AmiGO / QuickGO | ||||||||
| |||||||||
CAMK, also written as CaMK or CCaMK, is an abbreviation for the Ca2+/calmodulin-dependent protein kinase class of enzymes. CAMKs are activated by increases in the concentration of intracellular calcium ions (Ca2+) and calmodulin. When activated, the enzymes transfer phosphates from ATP to defined serine or threonine residues in other proteins, so they are serine/threonine-specific protein kinases. Activated CAMK is involved in the phosphorylation of transcription factors and therefore, in the regulation of expression of responding genes. CAMK also works to regulate the cell life cycle (i.e. programmed cell death), rearrangement of the cell's cytoskeletal network, and mechanisms involved in the learning and memory of an organism.[1]
Types
There are 2 common types of CAM Kinase proteins: specialized and multi-functional CAM kinases.
- Substrate-specific CAM Kinases
- only have one target that they can phosphorylate, such as myosin light chain kinases.[1] This group of proteins includes CAMK III. More on CAMKIII can be found following this link.
- Multi-functional CAM Kinases
- have multiple targets they can phosphorylate and are found in processes including the secretion of neurotransmitters, metabolism of glycogen, and the regulation of various transcription factors.[1] CAMK II is the main protein in this subset. More on CAMKII can be found following this link.
Substrate phosphorylation
Once calcium concentrations in the cell rise, CAM kinases become saturated and bind the maximum of four calcium molecules.[1] This calcium saturation activates the kinase and allows it to undergo a conformational change which permits the kinase to bind to its phosphorylation target sites. CAMK removes a phosphate group from ATP, most typically using a Mg2+ ion, and adds it to the CAM protein, rendering it active.[2] The CAM Kinase contains a highly concentrated glycine loop where the gamma phosphate from the donor ATP molecule is easily able to bind to the enzyme which then utilizes the metal ion to facilitate a smooth phosphate transfer to the target protein.[3] This phosphate transfer then activates the kinase's target and completes the phosphorylation cycle.
Figure 1 shows how the presence of calcium or calmodulin allows for the activation of CAM kinases (CAMK II).
Structure
All kinases have a common structure of a catalytic core including an ATP binding site along with a larger substrate binding site.[4] The catalytic core is typically composed of β-strands with the substrate binding site composed of α-helices.[5] Most all CAM kinases includes a variety of domains, including: a catalytic domain, a regulatory domain, an association domain, and a calcium/calmodulin binding domain.[6]
- CAMK I
- as shown in Figure 2, has a double-lobed structure, consisting of a catalytic, substrate-binding domain and an autoinhibitory domain.[1] For the autoinhibitory domain to become functional, it must cause the protein to conform in such a way that this domain completely blocks the substrate domain from taking in new targets. Figure 2 goes into detail showing the structure and domains of CAMK I.
- CAMK II
- has a variety of different forms, with CAMK 2A being the most common, as shown in Figure 3. CAMK 2A has a ring-like crystalline structure, composed of smaller functional groups. These groups allow for the CaM-dependent phosphorylation of targets, but also allows the structure to autophosphorylate itself and become CaM-independent,[7] as seen in Figure 1. This means once the CAMK 2A protein is initially activated by calcium or calmodulin, it can, in turn, further activate itself, so it doesn't become inactive even when it is without calcium or calmodulin.
Family members
Members of the CAMK enzyme class include, but are not limited to:
- CAMKI
- CAMKII
- CAMKIIα
- CAMKIIβ
- CAMKIIδ
- CAMKIIγ
- CAMKIII
- CAMKIV
- CAMKV CaM kinase like vesicle associated
- SCAMK
- Ca2+/calmodulin-dependent protein kinase kinase
- CAMKK1
- CAMKK2
Pseudokinases
Pseudokinases are pseudoenzymes, proteins that resemble enzymes structurally, but lack catalytic activity.
Some of these pseudokinases that are related to the CAMK family include:
References
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 "Ca(2+)/calmodulin-dependent protein kinases". Cellular and Molecular Life Sciences 65 (17): 2637–57. September 2008. doi:10.1007/s00018-008-8086-2. PMID 18463790.
- ↑ "Kinetic and catalytic mechanisms of protein kinases". Chemical Reviews 101 (8): 2271–90. August 2001. doi:10.1021/cr000230w. PMID 11749373.
- ↑ "Role of the glycine triad in the ATP-binding site of cAMP-dependent protein kinase". The Journal of Biological Chemistry 272 (27): 16946–54. July 1997. doi:10.1074/jbc.272.27.16946. PMID 9202006.
- ↑ "Genomic analysis of the eukaryotic protein kinase superfamily: a perspective". Genome Biology 4 (5): 111. 2003. doi:10.1186/gb-2003-4-5-111. PMID 12734000.
- ↑ "PKA: a portrait of protein kinase dynamics". Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics 1697 (1–2): 259–69. March 2004. doi:10.1016/j.bbapap.2003.11.029. PMID 15023366.
- ↑ "Neuronal CA2+/calmodulin-dependent protein kinase II: the role of structure and autoregulation in cellular function". Annual Review of Biochemistry 71 (1): 473–510. 2002-06-01. doi:10.1146/annurev.biochem.71.110601.135410. PMID 12045104.
- ↑ "CAMK2A calcium/calmodulin dependent protein kinase II alpha [Homo sapiens (human) - Gene - NCBI"]. https://www.ncbi.nlm.nih.gov/gene?Db=gene&Cmd=ShowDetailView&TermToSearch=815.
 |  |
