Biology:Thermodesulfobacteriota

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Short description: Phylum of Gram-negative bacteria

Thermodesulfobacteriota
Dvulgaris micrograph.JPG
Nitratidesulfovibrio vulgaris
Scientific classification e
Domain: Bacteria
Phylum: Thermodesulfobacteriota
Garrity & Holt 2021[1]
Classes[2]
  • "Anaeroferrophillalia" (sic) Murphy et al. 2021
  • Deferrisomatia Waite et al. 2020
  • Desulfarculia Waite et al. 2020
  • Desulfobaccia Waite et al. 2020
  • Desulfobacteria Waite et al. 2020
  • Desulfobulbia Waite et al. 2020
  • "Ca. Desulfofervidia" Waite et al. 2020
  • Desulfomonilia Waite et al. 2020
  • Desulfovibrionia Waite et al. 2020
  • Desulfuromonadia Waite et al. 2020
  • Dissulfuribacteria Waite et al. 2020
  • Syntrophia Waite et al. 2020
  • Syntrophobacteria Waite et al. 2020
  • Syntrophorhabdia Waite et al. 2020
  • Thermodesulfobacteria Hatchikian et al. 2002
  • "Zymogenia" Murphy et al. 2021
Synonyms[2]
  • "Ca. Dadabacteria" Hug et al. 2016
  • "Desulfobacterota" Waite et al. 2020
  • "Thermodesulfobacteraeota" Oren et al. 2015
  • Thermodesulfobacteria Garrity and Holt 2002
  • "Thermodesulfobacteriota" Whitman et al. 2018

The Thermodesulfobacteriota are a phylum[3] of thermophilic[4] sulfate-reducing bacteria.

A pathogenic intracellular thermodesulfobacteriote has recently been identified.[5]

Phylogeny

The phylogeny is based on phylogenomic analysis:

120 single copy marker proteins based GTDB 08-RS214[6][7][8]

Waite et al. 2020[2]

Thermodesulfo
Deferrisomatia

Deferrisomatales

"Dadaibacteria"

Desulfuromonadia

Geobacterales

Desulfuromonadales

Desulfomonilia

Desulfomonilales

Syntrophia

Syntrophales

Syntrophorhabdia

Syntrophorhabdales

Dissulfuribacteria

Dissulfuribacterales

"Thermodesulfobacteriia"

Thermodesulfobacteriales

Desulfobulbia

Desulfobulbales

"Desulfofervidia"

"Desulfofervidales"

Desulfovibrionia

Desulfovibrionales

Syntrophobacteria

Syntrophobacterales

Desulfobaccia

Desulfobaccales

Desulfarculia

"Adiutricales"

Desulfarculales

Desulfobacteria

Desulfatiglandales

Desulfobacterales

‑bacteriota


16S rRNA based LTP_08_2023[9][10][11]

Desulfobacterota G
Syntrophorhabdia

Syntrophorhabdales

Thermodesulfobacteriota

Thermodesulfobacteriales

"Thermodesulfobacteriia"
"Deferrisomatota"
Deferrisomatia

Deferrisomatales

"Bradymonadia"

Myxococcota

"Desulfuromonadota"

Geobacterales

Desulfuromonadales

Desulfuromonadia

Bdellovibrionota

Desulfobacterota

Syntrophobacterales

Desulfobulbales

Desulfomonilales

Desulfarculales

Syntrophales

Desulfobaccales

Desulfatiglandales

Desulfobacterales

Desulfobacteria
Desulfobacterota_A
Desulfovibrionia

Desulfovibrionales

Campylobacterota

Chrysiogenota

Deferribacterota

Pseudomonadota

"Deltaproteo

"Lambdaproteobacteria" {SAR324}

Bdellovibrionota

"Lernaellota" (FEN-1099)

"Binatota"
"Binatia"

"Binatales"

(Desulfobacterota B)

Myxococcota

"Deferrisomatota"
Deferrisomatia

Deferrisomatales

(Desulfobacterota C)
"Deferrimicrobiota"
"Deferrimicrobiia"

"Deferrimicrobiales"

"Anaeroferrophilia"

"Anaeroferrophilales"

(Desulfobacterota E)

"Modulibacteria"

"Methylomirabilota"

"Schekmanbacteria"

"Tectomicrobia"

Nitrospinota

Nitrospirota

"Desulfuromonadota"
Desulfuromonadia

Geobacterales

Desulfuromonadales

(Desulfobacterota F)
Thermodesulfo
"Zymogenia"

"Zymogenales"

Desulfomonilia

Desulfomonilales

Syntrophia

Syntrophales

Dissulfuribacteria
Dissulfuribacterales

"Thermodesulfobacteriia"
Thermodesulfobacteriales

Desulfobulbia

Desulfobulbales

"Desulfofervidia"

"Desulfofervidales"

Desulfovibrionia

Desulfovibrionales

Desulfobaccia

Desulfobaccales

Desulfarculia

"Adiutricales"

Desulfarculales

Syntrophobacteria

Syntrophobacterales

"Desulfatiglandia"

Desulfatiglandales

Desulfobacteria

Desulfobacterales

‑bacteriota
-bacteria"
"Aquificida"
Desulfobacterota G
Syntrophorhabdia

Syntrophorhabdales

"Acidulodesulfobacteriota"

"Acidulidesulfobacterales"
(SZUA-79)

"Acidulodesulfobacteriia"
"Dadaibacteriota"
"Dadabacteria"

"Nemesobacterales"

(Desulfobacterota D)

"Calescamantes"

"Thermosulfidibacterota"

Chrysiogenota

Deferribacterota

Aquificota

Campylobacterota

"Leptospirillaeota"

Pseudomonadota

See also

References

  1. "Valid publication of the names of forty-two phyla of prokaryotes". Int J Syst Evol Microbiol 71 (10): 5056. 2021. doi:10.1099/ijsem.0.005056. PMID 34694987. 
  2. 2.0 2.1 2.2 "Proposal to reclassify the proteobacterial classes Deltaproteobacteria and Oligoflexia, and the phylum Thermodesulfobacteria into four phyla reflecting major functional capabilities". Int J Syst Evol Microbiol 70 (11): 5972–6016. 2020. doi:10.1099/ijsem.0.004213. PMID 33151140. 
  3. "Microbiology and geochemistry of Little Hot Creek, a hot spring environment in the Long Valley Caldera". Geobiology 8 (2): 140–54. March 2010. doi:10.1111/j.1472-4669.2009.00228.x. PMID 20002204. Bibcode2010Gbio....8..140V. 
  4. "Thermodesulfobacterium hydrogeniphilum sp. nov., a thermophilic, chemolithoautotrophic, sulfate-reducing bacterium isolated from a deep-sea hydrothermal vent at Guaymas Basin, and emendation of the genus Thermodesulfobacterium". Int. J. Syst. Evol. Microbiol. 52 (Pt 3): 765–72. May 2002. doi:10.1099/ijs.0.02025-0. PMID 12054236. http://ijs.sgmjournals.org/cgi/pmidlookup?view=long&pmid=12054236. 
  5. "Lawsonia intracellularis contains a gene encoding a functional rickettsia-like ATP/ADP translocase for host exploitation". J. Bacteriol. 190 (17): 5746–52. September 2008. doi:10.1128/JB.00391-08. PMID 18606736. 
  6. "GTDB release 08-RS214". https://gtdb.ecogenomic.org/about#4%7C. 
  7. "bac120_r214.sp_label". https://data.gtdb.ecogenomic.org/releases/release214/214.0/auxillary_files/bac120_r214.sp_labels.tree. 
  8. "Taxon History". https://gtdb.ecogenomic.org/taxon_history/. 
  9. "The LTP". https://imedea.uib-csic.es/mmg/ltp/#LTP. 
  10. "LTP_all tree in newick format". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_all_08_2023.ntree. 
  11. "LTP_08_2023 Release Notes". https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_08_2023_release_notes.pdf. 

Wikidata ☰ Q20643853 entry