Biology:mir-390 microRNA precursor family

From HandWiki
mir-390
Identifiers
Symbolmir-390
RfamRF00689
miRBase familyMIPF0000101
Other data
RNA typemicroRNA
Domain(s)Eukaryota;
PDB structuresPDBe

In molecular biology mir-390 microRNA is a short RNA molecule. MicroRNAs function to regulate the expression levels of other genes by several mechanisms.

See also

References

  1. ↑ "MicroRNAs as regulators in plant metal toxicity response". Frontiers in Plant Science 3: 105. 2012. doi:10.3389/fpls.2012.00105. PMID 22661980. 
  2. ↑ "Genome-wide identification of microRNAs in larch and stage-specific modulation of 11 conserved microRNAs and their targets during somatic embryogenesis". Planta 236 (2): 647–57. August 2012. doi:10.1007/s00425-012-1643-9. PMID 22526500. 
  3. ↑ "Cytoplasmic Arabidopsis AGO7 accumulates in membrane-associated siRNA bodies and is required for ta-siRNA biogenesis". The EMBO Journal 31 (7): 1704–13. April 2012. doi:10.1038/emboj.2012.20. PMID 22327216. 
  4. ↑ "SoMART: a web server for plant miRNA, tasiRNA and target gene analysis". The Plant Journal 70 (5): 891–901. June 2012. doi:10.1111/j.1365-313X.2012.04922.x. PMID 22268718. 
  5. ↑ Bendahmane, Mohammed, ed (2011). "AGO1 and AGO2 act redundantly in miR408-mediated Plantacyanin regulation". PLOS ONE 6 (12): e28729. doi:10.1371/journal.pone.0028729. PMID 22174881. Bibcode: 2011PLoSO...628729M. 
  6. ↑ "Mining of miRNAs and potential targets from gene oriented clusters of transcripts sequences of the anti-malarial plant, Artemisia annua". Biotechnology Letters 34 (4): 737–45. April 2012. doi:10.1007/s10529-011-0808-0. PMID 22160362. 
  7. ↑ Baxter, Ivan, ed (2011). "High-throughput sequencing of RNA silencing-associated small RNAs in olive (Olea europaea L.)". PLOS ONE 6 (11): e27916. doi:10.1371/journal.pone.0027916. PMID 22140484. Bibcode: 2011PLoSO...627916D. 
  8. ↑ "Dehydration stress-responsive miRNA in Brachypodium distachyon: evident by genome-wide screening of microRNAs expression". OMICS 15 (11): 791–9. November 2011. doi:10.1089/omi.2011.0073. PMID 22122669. 
  9. ↑ "[Bioinformatic prediction of conserved microRNAs and their target genes in eggplant (Solanum melongena L.)]". Yi Chuan = Hereditas 33 (7): 776–84. July 2011. doi:10.3724/sp.j.1005.2011.00776. PMID 22049693. 
  10. ↑ "RDR6-mediated synthesis of complementary RNA is terminated by miRNA stably bound to template RNA". Nucleic Acids Research 40 (2): 594–9. January 2012. doi:10.1093/nar/gkr760. PMID 21930511. 
  11. ↑ "MicroRNAs in the shoot apical meristem of soybean". Journal of Experimental Botany 62 (8): 2495–506. May 2011. doi:10.1093/jxb/erq437. PMID 21504877. 
  12. ↑ "ragged seedling2 Encodes an ARGONAUTE7-like protein required for mediolateral expansion, but not dorsiventrality, of maize leaves". The Plant Cell 22 (5): 1441–51. May 2010. doi:10.1105/tpc.109.071613. PMID 20453116. 
  13. ↑ "miR390, Arabidopsis TAS3 tasiRNAs, and their AUXIN RESPONSE FACTOR targets define an autoregulatory network quantitatively regulating lateral root growth". The Plant Cell 22 (4): 1104–17. April 2010. doi:10.1105/tpc.109.072553. PMID 20363771. 
  14. ↑ "Overexpression of Osta-siR2141 caused abnormal polarity establishment and retarded growth in rice". Journal of Experimental Botany 61 (6): 1885–95. June 2010. doi:10.1093/jxb/erp378. PMID 20080824. 
  15. ↑ "Identification of MIR390a precursor processing-defective mutants in Arabidopsis by direct genome sequencing". Proceedings of the National Academy of Sciences of the United States of America 107 (1): 466–71. January 2010. doi:10.1073/pnas.0913203107. PMID 20018656. PMC 2806713. Bibcode: 2010PNAS..107..466C. http://ir.library.oregonstate.edu/xmlui/bitstream/1957/19992/1/pnas.200913203.pdf. 
  16. ↑ "Auxin regulation of the microRNA390-dependent transacting small interfering RNA pathway in Arabidopsis lateral root development". Nucleic Acids Research 38 (4): 1382–91. March 2010. doi:10.1093/nar/gkp1128. PMID 19969544. 
  17. ↑ "Novel miR390-dependent transacting siRNA precursors in plants revealed by a PCR-based experimental approach and database analysis". Journal of Biomedicine & Biotechnology 2009: 952304. 2009. doi:10.1155/2009/952304. PMID 19859540. 
  18. ↑ "Gene silencing of mannose 6-phosphate reductase in the parasitic weed Orobanche aegyptiaca through the production of homologous dsRNA sequences in the host plant". Plant Biotechnology Journal 7 (6): 487–98. August 2009. doi:10.1111/j.1467-7652.2009.00418.x. PMID 19490480. 
  19. ↑ "Small RNA analysis in Petunia hybrida identifies unusual tissue-specific expression patterns of conserved miRNAs and of a 24mer RNA". RNA 15 (6): 1012–20. June 2009. doi:10.1261/rna.1517209. PMID 19369427. 
  20. ↑ "MicroRNA expression profiles in conventional and micropropagated strawberry (Fragaria x ananassa Duch.) plants". Plant Cell Reports 28 (6): 891–902. June 2009. doi:10.1007/s00299-009-0693-3. PMID 19277667. 
  21. ↑ "Triggering the formation of tasiRNAs in Arabidopsis thaliana: the role of microRNA miR173". EMBO Reports 10 (3): 264–70. March 2009. doi:10.1038/embor.2008.247. PMID 19180117. 
  22. ↑ Copenhaver, Gregory P, ed (January 2009). "Regulation of small RNA accumulation in the maize shoot apex". PLOS Genetics 5 (1): e1000320. doi:10.1371/journal.pgen.1000320. PMID 19119413. 
  23. ↑ "Small RNA regulation of ovule development in the cotton plant, G. hirsutum L". BMC Plant Biology 8: 93. September 2008. doi:10.1186/1471-2229-8-93. PMID 18793449. 
  24. ↑ "The mechanism selecting the guide strand from small RNA duplexes is different among argonaute proteins". Plant & Cell Physiology 49 (4): 493–500. April 2008. doi:10.1093/pcp/pcn043. PMID 18344228. 
  25. ↑ "Specificity of ARGONAUTE7-miR390 interaction and dual functionality in TAS3 trans-acting siRNA formation". Cell 133 (1): 128–41. April 2008. doi:10.1016/j.cell.2008.02.033. PMID 18342362. 
  26. ↑ "Common functions for diverse small RNAs of land plants". The Plant Cell 19 (6): 1750–69. June 2007. doi:10.1105/tpc.107.051706. PMID 17601824. 
  27. ↑ "A two-hit trigger for siRNA biogenesis in plants". Cell 127 (3): 565–77. November 2006. doi:10.1016/j.cell.2006.09.032. PMID 17081978. 
  28. ↑ "Identification of trans-acting siRNAs in moss and an RNA-dependent RNA polymerase required for their biogenesis". The Plant Journal 48 (4): 511–21. November 2006. doi:10.1111/j.1365-313X.2006.02895.x. PMID 17076803. 
  29. ↑ "Regulation of AUXIN RESPONSE FACTOR3 by TAS3 ta-siRNA affects developmental timing and patterning in Arabidopsis". Current Biology 16 (9): 939–44. May 2006. doi:10.1016/j.cub.2006.03.065. PMID 16682356. 
  30. ↑ "microRNA-directed phasing during trans-acting siRNA biogenesis in plants". Cell 121 (2): 207–21. April 2005. doi:10.1016/j.cell.2005.04.004. PMID 15851028. 

External links



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