Chemistry:Clavulanic acid

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Short description: Molecule used to overcome antibiotic resistance in bacteria
Clavulanic acid
Clavulanic acid.svg
Clavulanic-acid-based-on-xtal-3D-bs-17.png
Clinical data
Pronunciation/ˌklævjʊˈlænɪk/
AHFS/Drugs.comInternational Drug Names
Pregnancy
category
  • AU: B1
  • US: B (No risk in non-human studies)
Routes of
administration
Oral, IV
ATC code
Legal status
Legal status
  • AU: S4 (Prescription only)
  • In general: ℞ (Prescription only)
Pharmacokinetic data
Bioavailability"Well absorbed"
MetabolismHepatic (extensive)
Elimination half-life1 hour
ExcretionRenal (30–40%)
Identifiers
CAS Number
PubChem CID
DrugBank
ChemSpider
UNII
KEGG
ChEBI
ChEMBL
Chemical and physical data
FormulaC8H9NO5
Molar mass199.162 g·mol−1
3D model (JSmol)
  (verify)

Clavulanic acid is a β-lactam drug that functions as a mechanism-based β-lactamase inhibitor. While not effective by itself as an antibiotic, when combined with penicillin-group antibiotics, it can overcome antibiotic resistance in bacteria that secrete β-lactamase, which otherwise inactivates most penicillins.

In its most common preparations, potassium clavulanate (clavulanic acid as a salt of potassium) is combined with:

  • amoxicillin (co-amoxiclav, trade names Augmentin, Clavulin, Tyclav, Clavaseptin (veterinary), Clavamox (veterinary), Synulox (veterinary), and others)
  • ticarcillin (co-ticarclav, trade name Timentin)

Clavulanic acid was patented in 1974.[1]

Medical uses

Amoxicillin–clavulanic acid is a first-line treatment for many types of infections, including sinus infections, and urinary tract infections, including pyelonephritis. This is, in part, because of its efficacy against gram-negative bacteria which tend to be more difficult to control than gram-positive bacteria with chemotherapeutic antibiotics.

Adverse effects

The use of clavulanic acid with penicillins has been associated with an increased incidence of cholestatic jaundice and acute hepatitis during therapy or shortly after. The associated jaundice is usually self-limiting and very rarely fatal.[2][3]

The United Kingdom Committee on Safety of Medicines (CSM) recommends that treatments such as amoxicillin/clavulanic acid preparations be reserved for bacterial infections likely to be caused by amoxicillin-resistant β-lactamase-producing strains, and that treatment should not normally exceed 14 days.

Allergic reactions have been reported.[4]

Sources

The name is derived from strains of Streptomyces clavuligerus, which produces clavulanic acid.[5][6]

Biosynthesis

The intermediates of the biosynthesis of clavulanic acid[7]

The β-lactam like structure of clavulanic acid looks structurally similar to penicillin, but the biosynthesis of this molecule involves a different biochemical pathway. Clavulanic acid is produced by the bacterium Streptomyces clavuligerus, using glyceraldehyde-3-phosphate and L-arginine as starting materials.[7][8] Although each of the intermediates of the pathway are known, the exact mechanism for all of the enzymatic reactions are not fully understood. The process mainly involves 3 enzymes: clavaminate synthase, β-lactam synthetase, and N2-(2-carboxyethyl)-L-arginine (CEA) synthase.[7] Clavaminate synthase is a non-heme oxygenase dependent on iron and α-keto-glutarate and is encoded by orf5 of the clavulanic acid gene cluster. The specific mechanism of how this enzyme works is not fully understood, but this enzyme regulates 3 steps in the overall synthesis of clavulanic acid. All 3 steps occur in the same region of the catalytic, iron-containing reaction center, yet do not occur in sequence and affect different areas of the clavulanic acid structure.[9]

β-lactam synthetase is a 54.5 kDa protein that is encoded by orf3 of the clavulanic acid gene cluster, and shows similarity to asparagine synthase – Class B enzymes. The exact mechanism on how this enzyme works to synthesize the β-lactam is not proven, but is believed to occur in coordination with a CEA synthase and ATP.[10]

Proposed mechanism of beta-lactam synthetase in the biosynthesis of clavulanic acid.[7]

CEA synthase is a 60.9 kDA protein and is the first gene found in the clavulanic acid biosynthesis gene cluster, encoded by orf2 of the clavulanic acid gene cluster. The specific mechanism of how this enzyme works is still under investigation; however, it is known that this enzyme has the ability to couple together glyceraldehyde-3-phosphate with L-arginine in the presence of thiamine diphosphate (TDP or thiamine pyrophosphate), which is the first step of the clavulanic acid biosynthesis.[11]

Proposed mechanism of CEA synthetase in the biosynthesis of clavulanic acid.[7]

History

Clavulanic acid was discovered around 1974-75 by British scientists working at the drug company Beecham from the bacteria Streptomyces clavuligerus.[12] After several attempts, Beecham finally filed for US patent protection for the drug in 1981, and U.S. Patents 4,525,352, 4,529,720, and 4,560,552 were granted in 1985.

Clavulanic acid has negligible intrinsic antimicrobial activity, despite sharing the β-lactam ring that is characteristic of β-lactam antibiotics. However, the similarity in chemical structure allows the molecule to interact with the enzyme β-lactamase secreted by certain bacteria to confer resistance to β-lactam antibiotics.

Clavulanic acid is a suicide inhibitor, covalently bonding to a serine residue in the active site of the β-lactamase. This restructures the clavulanic acid molecule, creating a much more reactive species that attacks another amino acid in the active site, permanently inactivating it, and thus inactivating the enzyme.

This inhibition restores the antimicrobial activity of β-lactam antibiotics against lactamase-secreting resistant bacteria. Despite this, some bacterial strains that are resistant even to such combinations have emerged.

References

  1. (in en) Analogue-based Drug Discovery. John Wiley & Sons. 2006. p. 490. ISBN 9783527607495. https://books.google.com/books?id=FjKfqkaKkAAC&pg=PA490. 
  2. Joint Formulary Committee. British National Formulary, 47th edition. London: British Medical Association and Royal Pharmaceutical Society of Great Britain; 2004.
  3. "Drug Record - Amoxicillin-Clavulanate". LiverTox - Clinical and Research Information on Drug-Induced Liver Injury. 2012. PMID 31643176. http://livertox.nih.gov/AmoxicillinClavulanate.htm. Retrieved April 24, 2013. 
  4. "Hypersensitivity to clavulanic acid in children". Allergologia et Immunopathologia 36 (5): 308–310. 2008. doi:10.1016/S0301-0546(08)75228-5. PMID 19080805. http://www.elsevier.es/en/revistas/allergologia-et-immunopathologia-105/hypersensitivity-to-clavulanic-acid-in-children-13130586-research-letters-2008. Retrieved 2011-11-11. 
  5. "ORF17 from the clavulanic acid biosynthesis gene cluster catalyzes the ATP-dependent formation of N-glycyl-clavaminic acid". The Journal of Biological Chemistry 281 (1): 279–287. January 2006. doi:10.1074/jbc.M507711200. PMID 16251194. 
  6. "Two sets of paralogous genes encode the enzymes involved in the early stages of clavulanic acid and clavam metabolite biosynthesis in Streptomyces clavuligerus". Antimicrobial Agents and Chemotherapy 48 (3): 930–939. March 2004. doi:10.1128/AAC.48.3.930-939.2004. PMID 14982786. 
  7. 7.0 7.1 7.2 7.3 7.4 "New reactions in clavulanic acid biosynthesis". Current Opinion in Chemical Biology 6 (5): 583–589. October 2002. doi:10.1016/S1367-5931(02)00392-7. PMID 12413541. 
  8. "Clavulanic acid: a beta-lactamase-inhiting beta-lactam from Streptomyces clavuligerus". Antimicrobial Agents and Chemotherapy 11 (5): 852–857. May 1977. doi:10.1128/AAC.11.5.852. PMID 879738. 
  9. "A single monomeric iron center in clavaminate synthase catalyzes three nonsuccessive oxidative transformations". Bioorganic & Medicinal Chemistry 4 (7): 1059–1064. July 1996. doi:10.1016/0968-0896(96)00088-0. PMID 8831977. 
  10. "Kinetic mechanism of the beta-lactam synthetase of Streptomyces clavuligerus". Biochemistry 39 (37): 11187–11193. September 2000. doi:10.1021/bi000709i. PMID 10985764. 
  11. "Origin of the β-Lactam Carbons in Clavulanic Acid from an Unusual Thiamine Pyrophosphate-Mediated Reaction". Journal of the American Chemical Society 121 (39): 9223–9224. 1999. doi:10.1021/ja9923134. 
  12. "Beta-lactamase inhibitors and reversal of antibiotic resistance". Trends in Pharmacological Sciences 12 (6): 227–232. June 1991. doi:10.1016/0165-6147(91)90557-9. PMID 2048218.